beagle: package for phasing genotypes and for imputing ungenotyped markers

Contents

  1. Overview of package
  2. Overview of package
    1. General usage
  3. Availability of package by cluster

Overview of package

General information about package
Package: beagle
Description: package for phasing genotypes and for imputing ungenotyped markers
For more information: https://faculty.washington.edu/browning/beagle/beagle.html
Categories:
License: Unknown

General usage information

Beagle is a package for phasing genotypes and for imputing ungenotyped markers

This module will add the command beagle to your path

Available versions of the package beagle, by cluster

This section lists the available versions of the package beagleon the different clusters.

Available versions of beagle on the Deepthought2 cluster (RHEL8)

Available versions of beagle on the Deepthought2 cluster (RHEL8)
Version Module tags CPU(s) optimized for GPU ready?
5.1 beagle/5.1 ivybridge, x86_64 Y

Available versions of beagle on the Deepthought2 cluster (RHEL6) [DEPRECATED]

Available versions of beagle on the Deepthought2 cluster (RHEL6) [DEPRECATED]
Version Module tags CPU(s) optimized for GPU ready?
2.1.2 beagle/2.1.2/cuda/6.5.14/avx ivybridge Y
2.1.2 beagle/2.1.2/nocuda/avx ivybridge N