bedtools2: swiss-army knife of genomics analysis tasks

Contents

  1. Overview of package
  2. Overview of package
    1. General usage
  3. Availability of package by cluster

Overview of package

General information about package
Package: bedtools2
Description: swiss-army knife of genomics analysis tasks
For more information: https://bedtools.readthedocs.io/en/latest
Categories:
License: Unknown

General usage information

Bedtools2 is a collection of utilities for a wide-range of genomics analysis tasks. The most widely-used tools support set theoretic operations on the genome.

This module will add the bedtools command to your PATH

Available versions of the package bedtools2, by cluster

This section lists the available versions of the package bedtools2on the different clusters.

Available versions of bedtools2 on the Deepthought2 cluster (RHEL8)

Available versions of bedtools2 on the Deepthought2 cluster (RHEL8)
Version Module tags CPU(s) optimized for GPU ready?
2.27.1 bedtools2/2.27.1 ivybridge, x86_64 Y

Available versions of bedtools2 on the Juggernaut cluster

Available versions of bedtools2 on the Juggernaut cluster
Version Module tags CPU(s) optimized for GPU ready?
2.27.1 bedtools2/2.27.1 N

Available versions of bedtools2 on the Deepthought2 cluster (RHEL6) [DEPRECATED]

Available versions of bedtools2 on the Deepthought2 cluster (RHEL6) [DEPRECATED]
Version Module tags CPU(s) optimized for GPU ready?
2.29.2 bedtools/2.29.2 x86_64 N