AdapterRemoval: Tool for removing remnant adapter sequences from sequencing data

Overview of package

Package:	AdapterRemoval
Description:	Tool for removing remnant adapter sequences from sequencing data
For more information:	https://adapterremoval.readthedocs.io
Categories:	Genomics
License:	OpenSource (GPL)

General Usage

AdapterRemoval searches for and removes adapter sequences from High-Throughput Sequencing (HTS) data and (optionally) trims low quality bases from the 3' end of reads following adapter removal. AdapterRemoval can analyze both single end and paired end data, and can be used to merge overlapping paired-ended reads into (longer) consensus sequences. Additionally, AdapterRemoval can construct a consensus adapter sequence for paired-ended reads, if which this information is not available.

This module will add the AdapterRemoval command to your PATH.

Available versions by cluster

This section lists the available versions of the package AdapterRemovalon the UMD HPC clusters.

Versions available on the Zaratan cluster

Version	Module tags	CPU(s) optimized for	GPU ready?
2.3.1	2.3.1	icelake, x86_64, zen2	Yes