hmmer: biosequence analyser using profile hidden Markov models

Overview of package

Package:	hmmer
Description:	biosequence analyser using profile hidden Markov models
For more information:	http://hmmer.org/
Categories:	Genomics
License:	OpenSource (BSD-3)

General Usage

HMMER is used for searching sequence databases for sequence homologs, and for making sequence alignments. It implements methods using probabilistic models called profile hidden Markov models (profile HMMs).

This module will add the jackhmmer, nhmmer, phmmer and related commands to your PATH

Available versions by cluster

This section lists the available versions of the package hmmeron the UMD HPC clusters.

Versions available on the Zaratan cluster

Version	Module tags	CPU(s) optimized for	GPU ready?
3.3	3.3	zen	Yes
3.3.2	3.3.2	icelake, x86_64, zen2	Yes